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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109308881_109311768_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109308881 - 109311768

Intron Length:

2888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCGCC

5'SS Class:

major

3'SS Sequence:

CCCTGCGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

AGCTTAACAGCT

Flanking Amino Acid:

LTAELSSRLSGASDLTAFSD

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

65.5

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

67.6

0.4

0.9

57.1

38.7

Minor 5ss

38.1

-1.3

3.3

52.1

44.7

Minor BPS

38.2

-0.8

53.57

41.2

Associated Gene:

Gene:

RUNX1

Ensembl Gene ID:

ENSAPLG00000007026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039414

109307387 - 109461129

153743

ENSAPLT00000007286

109308387 - 109374984

66598

ENSAPLT00000007285

109308330 - 109461129

152800