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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109311931_109337600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109311931 - 109337600

Intron Length:

25670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTTCTCATTG

Flanking Amino Acid:

FNPQPQSQIQDTRQVQPSPP

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

78.8

35.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.83

0.7

81.8

28.4

Minor 5ss

36.6

-1.5

2.6

39.1

38.9

Minor BPS

49.6

-0.1

1.9

58.64

43.9

Associated Gene:

Gene:

RUNX1

Ensembl Gene ID:

ENSAPLG00000007026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039414

109307387 - 109461129

153743

ENSAPLT00000007285

109308330 - 109461129

152800