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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109311931_109353849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109311931 - 109353849

Intron Length:

41919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTTCTCATTG

Flanking Amino Acid:

ITVDGPREPRNTRQVQPSPP

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.83

0.7

81.8

28.4

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

49.6

-0.1

1.9

58.64

43.9

Associated Gene:

Gene:

RUNX1

Ensembl Gene ID:

ENSAPLG00000007026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007286

109308387 - 109374984

66598