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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109353955_109370338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109353955 - 109370338

Intron Length:

16384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TGTTCAGTAACC

Flanking Amino Acid:

DLRFVGRSGRGKSFTLTITV

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

83.8

0.84

73.6

41.8

Major PPT

85.4

0.8

80.4

31.6

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

57.8

0.23

2.3

76.59

39.2

Associated Gene:

Gene:

RUNX1

Ensembl Gene ID:

ENSAPLG00000007026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039414

109307387 - 109461129

153743

ENSAPLT00000007286

109308387 - 109374984

66598

ENSAPLT00000007285

109308330 - 109461129

152800