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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109370496_109374714_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109370496 - 109374714

Intron Length:

4219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGCGCTTTGATT

Flanking Amino Acid:

CNKTLPIAFKVVALGDVPDG

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

75.5

40.4

Major BPS

0.85

0.9

39.9

Major PPT

78.7

0.65

0.9

72.8

37.3

Minor 5ss

35.8

-1.6

3.2

51.3

45.1

Minor BPS

0.39

1.4

70.87

41.1

Associated Gene:

Gene:

RUNX1

Ensembl Gene ID:

ENSAPLG00000007026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007285

109308330 - 109461129

152800

ENSAPLT00000039414

109307387 - 109461129

153743

ENSAPLT00000007286

109308387 - 109374984

66598