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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109374969_109411280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109374969 - 109411280

Intron Length:

36312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGGTC

5'SS Class:

major

3'SS Sequence:

CGTATCCCCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CCTCACTCAACA

Flanking Amino Acid:

VSSLKAFIPTDTSTSRRFTP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

69.8

34.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

65.2

0.34

0.8

58.8

32.8

Minor 5ss

27.7

-2.6

3.6

40.1

46.3

Minor BPS

51.2

0.03

1.8

62.2

43.6

Associated Gene:

Gene:

RUNX1

Ensembl Gene ID:

ENSAPLG00000007026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007285

109308330 - 109461129

152800