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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109552088_109553705_F

Intron Information:

Intron Rank:

134616

Intron Class:

major

Intron Phase:

Intron Coordinates:

109552088 - 109553705

Intron Length:

1618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

GTGTTCCTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

0.54

0.9

67.9

32.2

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

48.9

-0

1.9

68.77

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022364

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026067

109551738 - 109553921

2184