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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109870316_109873615_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

109870316 - 109873615

Intron Length:

3300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTACAAAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTACAA

U12 Branch Point Sequence:

TGCCTCTTACAA

Flanking Amino Acid:

LVNNAAIAFKVNDQTPFAVQ

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.9

41.1

Major BPS

61.2

0.28

1.1

70.6

34.3

Major PPT

0.13

1.1

57.6

35.8

Minor 5ss

32.4

-2

3.2

43.2

Minor BPS

48.8

-0

1.7

58.32

41.1

Associated Gene:

Gene:

CBR1

Ensembl Gene ID:

ENSAPLG00000015892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016575

109868798 - 109875763

6966