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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109873724_109875326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109873724 - 109875326

Intron Length:

1603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TATTCTTTATTC

Flanking Amino Acid:

TELLPIMKPYGRVVNVSSMA

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

95.5

1.02

0.5

95.9

14.1

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

0.55

1.5

75.2

35.6

Associated Gene:

Gene:

CBR1

Ensembl Gene ID:

ENSAPLG00000015892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016575

109868798 - 109875763

6966