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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1098847_1099673_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

1098847 - 1099673

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TACTGCCTCTCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

GAATCCTTAGCT

Flanking Amino Acid:

NPYTNSILEYKNAHGKIIIL

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

73.5

0.59

81.3

29.9

Major PPT

73.3

0.52

0.9

69.5

36.4

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

69.2

0.68

1.6

79.61

41.6

Associated Gene:

Gene:

CEP41

Ensembl Gene ID:

ENSAPLG00000007184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031073

1095551 - 1100780

5230

ENSAPLT00000007489

1093743 - 1100780

7038