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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109894089_109894812_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109894089 - 109894812

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TATTCACAAACA

Flanking Amino Acid:

LFFFPFYTALDCDESAILLR

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.5

37.2

Major BPS

100

1.24

0.5

100

Major PPT

81.1

0.7

0.8

74.8

34.8

Minor 5ss

-1.9

2.9

37.4

41.9

Minor BPS

49.2

-0

2.2

70.91

40.6

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361