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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109899619_109900113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109899619 - 109900113

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTATTTATTT

Flanking Amino Acid:

LVFLLDVIPLELYSEVQTQY

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

67.6

39.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

83.3

0.75

0.8

82.5

33.6

Minor 5ss

30.2

-2.3

3.2

35.2

42.4

Minor BPS

58.1

0.33

1.8

76.23

41.2

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361