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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109900306_109901133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109900306 - 109901133

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

GCCACATTAACC

Flanking Amino Acid:

LDVETGSGNGSPVKRDSGDV

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

81.8

38.5

Major BPS

69.5

0.49

71.3

30.3

Major PPT

79.3

0.66

0.9

77.4

36.9

Minor 5ss

39.8

-1.1

3.2

51.2

45.5

Minor BPS

55.8

0.16

1.7

61.15

43.6

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361