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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109901825_109903268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109901825 - 109903268

Intron Length:

1444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

CCTCGCTTATCT

Flanking Amino Acid:

QLYLSLFQIPGGCDASFPLW

Intron Amino Acid Position:

784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

0.82

0.8

83.9

25.3

Major PPT

69.2

0.43

67.4

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

49.5

0.05

2.1

68.82

47.8

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361