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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109906510_109908197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109906510 - 109908197

Intron Length:

1688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

CTCTTCTTGATT

Flanking Amino Acid:

IHYIKQKNSAEDMHVWLHKK

Intron Amino Acid Position:

1023

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

66.4

45.1

Major BPS

83.8

0.84

73.6

41.8

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

41.1

-1

3.2

56.5

47.6

Minor BPS

69.4

0.69

1.2

77.76

39.6

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361