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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109910535_109911145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109910535 - 109911145

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTATTTTAATA

Flanking Amino Acid:

LLDHPNQTKKSLAEPANLRN

Intron Amino Acid Position:

1599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.8

0.67

0.8

73.3

37.1

Minor 5ss

40.9

-1

3.2

59.5

Minor BPS

67.6

0.55

1.2

72.13

33.9

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361