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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109915921_109917279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109915921 - 109917279

Intron Length:

1359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTCT

5'SS Class:

major

3'SS Sequence:

GGTTATTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

GGTTATTTTATA

Flanking Amino Acid:

ENKKDQKDLQEVTQKILEAV

Intron Amino Acid Position:

1823

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.6

39.6

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

75.5

0.57

0.9

41.6

Minor 5ss

37.7

-1.4

3.6

56.7

47.5

Minor BPS

49.4

-0

1.8

61.5

38.2

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361