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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109917422_109917824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109917422 - 109917824

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGTGA

5'SS Class:

major

3'SS Sequence:

TTGCCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

CAAAACTAAACA

Flanking Amino Acid:

PDEFNVEDTNDTSVAPSSMV

Intron Amino Acid Position:

1870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

61.2

39.8

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

82.6

0.73

0.8

31.6

Minor 5ss

36.3

-1.6

3.3

44.5

45.2

Minor BPS

47.3

-0.2

1.9

55.39

42.8

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361