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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109919894_109920309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109919894 - 109920309

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGACGT

5'SS Class:

major

3'SS Sequence:

ATATCTTATACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

CCTTCTATATCT

Flanking Amino Acid:

AFFQMDTSCNHWRSIIDHLL

Intron Amino Acid Position:

1983

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

60.5

44.3

Major BPS

82.6

0.81

0.8

71.7

Major PPT

75.6

0.58

69.8

39.9

Minor 5ss

35.9

-1.6

3.3

54.1

43.6

Minor BPS

52.3

0.15

1.9

72.16

45.1

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361