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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109921419_109921900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109921419 - 109921900

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTCTTCACT

Flanking Amino Acid:

QYHLYLPLIQERLSENLRVG

Intron Amino Acid Position:

2047

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

27.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

80.1

0.68

77.4

41.2

Minor 5ss

43.2

-0.7

3.3

64.8

46.5

Minor BPS

78.1

0.97

1.6

95.32

31.5

Associated Gene:

Gene:

DOP1B

Ensembl Gene ID:

ENSAPLG00000015059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015719

109884324 - 109924684

40361