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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109930521_109934621_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
109930521 - 109934621

Intron Length:
4101

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTGAGCGGC

5'SS Class:
major

3'SS Sequence:
TGGTTCATTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTAAT

U12 Branch Point Sequence:
AGTACACAAACT

Flanking Amino Acid:
KTQGGIRLSALCPKFLHTNS

Intron Amino Acid Position:
14

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1
57.9
41.8

Major BPS
77.9
0.69
0.8
75.9
25

Major PPT
77.9
0.63
0.9
74.5
40

Minor 5ss
31.7
-2.1
3.3
41.6
45.3

Minor BPS
44.5
-0.3
2.2
66.48
43.2

Associated Gene:

Gene:
MORC3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

109930482 - 109957407
26926