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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109960279_109961629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109960279 - 109961629

Intron Length:

1351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

CTTTTGTAACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGTTTCTGAAAA

Flanking Amino Acid:

ASAGVDTAVRIWKVEKGPDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.3

63.1

43.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

68.7

0.42

63.4

Minor 5ss

31.6

-2.1

2.6

32.3

34.9

Minor BPS

64.5

0.45

1.5

74.4

36.4

Associated Gene:

Gene:

CHAF1B

Ensembl Gene ID:

ENSAPLG00000014150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014815

109960153 - 109974306

14154