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Intron Name: Anas_platyrhynchos_platyrhynchos_1_109962595_109964216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109962595 - 109964216

Intron Length:

1622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTCAA

5'SS Class:

major

3'SS Sequence:

TGCTGGCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTCACCTTAATA

Flanking Amino Acid:

KENWTVVKTLRGHLEDVYDI

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

40.2

Major BPS

0.75

78.6

Major PPT

0.41

58.1

43.2

Minor 5ss

32.2

-2

3.1

40.8

45.4

Minor BPS

77.7

0.87

1.2

36.3

Associated Gene:

Gene:

CHAF1B

Ensembl Gene ID:

ENSAPLG00000014150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014815

109960153 - 109974306

14154