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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110098246_110100904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110098246 - 110100904

Intron Length:

2659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGGAC

5'SS Class:

major

3'SS Sequence:

TTCTCTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCTTTTTTACCC

Flanking Amino Acid:

GQGAGIPFASDFGWLCFRGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

60.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

88.6

0.87

0.6

83.7

24.6

Minor 5ss

28.2

-2.5

3.7

40.2

46.2

Minor BPS

64.7

0.44

1.6

72.92

38.9

Associated Gene:

Gene:

SIM2

Ensembl Gene ID:

ENSAPLG00000014050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014645

110097602 - 110142531

44930