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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110100995_110119075_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110100995 - 110119075

Intron Length:

18081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTATGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

TCTTCAGTAAAA

Flanking Amino Acid:

NGICTSWLISEYEIERSFFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

53.6

0.09

59.9

32.5

Major PPT

84.5

0.78

0.8

81.3

36.2

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

49.4

-0

2.3

69.75

42.3

Associated Gene:

Gene:

SIM2

Ensembl Gene ID:

ENSAPLG00000014050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014645

110097602 - 110142531

44930