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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110151278_110154134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110151278 - 110154134

Intron Length:

2857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTGTCTTCTTC

Flanking Amino Acid:

LIETTFHILIGFGFNVNNSN

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

86.8

0.83

0.7

85.2

29.6

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

40.4

-0.7

3.5

64.92

41.8

Associated Gene:

Gene:

HLCS

Ensembl Gene ID:

ENSAPLG00000013775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014362

110150434 - 110270750

120317