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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110154250_110157512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110154250 - 110157512

Intron Length:

3263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTCAC

5'SS Class:

major

3'SS Sequence:

TTTGCTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTGTTTCTAAAT

Flanking Amino Acid:

ESVRSIPGYEDIELRVKWPN

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.2

41.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

83.1

0.74

0.7

81.8

30.3

Minor 5ss

46.1

-0.4

2.6

61.5

43.4

Minor BPS

57.1

0.3

1.8

77.26

39.3

Associated Gene:

Gene:

HLCS

Ensembl Gene ID:

ENSAPLG00000013775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014362

110150434 - 110270750

120317