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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110256743_110260085_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110256743 - 110260085

Intron Length:

3343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTGT

5'SS Class:

major

3'SS Sequence:

CATATCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GATTTTTGAAGT

Flanking Amino Acid:

DNGGEAILSQVHLELDISSV

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.4

43.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

66.4

0.37

58.4

42.6

Minor 5ss

37.5

-1.4

3.5

56.6

47.6

Minor BPS

52.9

0.17

1.7

70.24

40.7

Associated Gene:

Gene:

HLCS

Ensembl Gene ID:

ENSAPLG00000013775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014362

110150434 - 110270750

120317