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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110263943_110269291_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110263943 - 110269291

Intron Length:

5349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GATTTATTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATGATTTATTC

Flanking Amino Acid:

LQKVPVSSKEVVKWSDYCSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

71.1

0.48

0.9

62.9

42.9

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

48.1

-0.1

1.8

59.96

39.7

Associated Gene:

Gene:

HLCS

Ensembl Gene ID:

ENSAPLG00000013775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014362

110150434 - 110270750

120317