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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110293803_110296605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110293803 - 110296605

Intron Length:

2803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATGTCTTTAATA

Flanking Amino Acid:

APLNSTNTVTDNYAKKQQQK

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

79.7

29.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

82.2

0.72

0.8

78.3

30.6

Minor 5ss

41.6

-0.9

3.1

56.5

47.5

Minor BPS

76.8

0.84

1.1

77.29

33.9

Associated Gene:

Gene:

PIGP

Ensembl Gene ID:

ENSAPLG00000022878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034614

110292146 - 110298324

6179

ENSAPLT00000029460

110286230 - 110298324

12095