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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110296725_110297238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110296725 - 110297238

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

AAATTTTGAAAT

Flanking Amino Acid:

FSLGLTYWPQKYWAVALPAY

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

84.7

0.86

74.3

40.7

Major PPT

75.3

0.57

0.9

37.2

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

52.4

0.15

1.5

66.58

37.4

Associated Gene:

Gene:

PIGP

Ensembl Gene ID:

ENSAPLG00000022878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034614

110292146 - 110298324

6179

ENSAPLT00000029460

110286230 - 110298324

12095