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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110340769_110341187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110340769 - 110341187

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTATTCTAATA

Flanking Amino Acid:

LKKQGNEDILTNNIKVKNKN

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

57.9

0.24

1.6

72.08

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012781

110333659 - 110359285

25627