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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110363498_110365042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110363498 - 110365042

Intron Length:

1545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

GATTACTAAATG

Flanking Amino Acid:

PTLETTNFKVEFEVNIVVLL

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

68.8

42.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

74.7

0.56

0.7

72.2

Minor 5ss

32.2

-2

3.1

37.3

42.5

Minor BPS

50.9

-0.1

1.9

58.44

43.1

Associated Gene:

Gene:

VPS26C

Ensembl Gene ID:

ENSAPLG00000011951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039533

110363353 - 110385353

22001