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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110364509_110365042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110364509 - 110365042

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCATTTGTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTAAGA

Flanking Amino Acid:

PTLETTNFKVASTSEILLAH

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

68.8

42.2

Major BPS

100

1.24

0.5

100

Major PPT

0.45

1.1

71.1

38.6

Minor 5ss

32.2

-2

3.1

37.3

42.5

Minor BPS

70.8

0.65

1.9

84.69

35.1

Associated Gene:

Gene:

VPS26C

Ensembl Gene ID:

ENSAPLG00000011951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012462

110364396 - 110385353

20958