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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110365728_110368238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110365728 - 110368238

Intron Length:

2511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCATCTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TTCTCCCCATCT

Flanking Amino Acid:

TPETLQNVKERASLPKFLIR

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

72.9

0.51

0.8

64.1

36.6

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

49.8

0.07

2.1

77.09

Associated Gene:

Gene:

VPS26C

Ensembl Gene ID:

ENSAPLG00000011951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039533

110363353 - 110385353

22001

ENSAPLT00000012462

110364396 - 110385353

20958