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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110368314_110370806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110368314 - 110370806

Intron Length:

2493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAATTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTGTTTTAATT

Flanking Amino Acid:

KTCEFIVHSLSQKGKLTPSP

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

68.8

42.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.1

0.7

0.9

74.2

39.4

Minor 5ss

32.2

-2

3.1

37.3

42.5

Minor BPS

69.8

0.7

1.3

81.14

35.2

Associated Gene:

Gene:

VPS26C

Ensembl Gene ID:

ENSAPLG00000011951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039533

110363353 - 110385353

22001

ENSAPLT00000012462

110364396 - 110385353

20958