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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110370888_110375580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110370888 - 110375580

Intron Length:

4693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

CCATTCTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAC

U12 Branch Point Sequence:

TTCTTTGCCACC

Flanking Amino Acid:

TYHGVFVNIQYTLRCDMRRS

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

52.3

0.06

1.4

64.2

Major PPT

0.5

68.6

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

41.1

-0.7

2.4

42.6

Associated Gene:

Gene:

VPS26C

Ensembl Gene ID:

ENSAPLG00000011951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039533

110363353 - 110385353

22001

ENSAPLT00000012462

110364396 - 110385353

20958