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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110375731_110377757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110375731 - 110377757

Intron Length:

2027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

AAATCTTTATTT

Flanking Amino Acid:

VFEAFYNSVKPIQIINSTIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

88.1

0.86

0.7

84.3

30.4

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

60.9

0.42

1.5

72.35

38.8

Associated Gene:

Gene:

VPS26C

Ensembl Gene ID:

ENSAPLG00000011951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039533

110363353 - 110385353

22001

ENSAPLT00000012462

110364396 - 110385353

20958