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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1104256_1104379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1104256 - 1104379

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTCTTCCCCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTACAA

U12 Branch Point Sequence:

TCTTCCCCCAAG

Flanking Amino Acid:

YTYGSIITTIYQASGGTIDW

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

49.4

-0

1.1

58.6

36.6

Major PPT

69.7

0.44

68.3

32.4

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

42.3

-0.7

2.3

53.67

46.6

Associated Gene:

Gene:

CPA1

Ensembl Gene ID:

ENSAPLG00000030146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022364

1104068 - 1109613

5546