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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1105806_1105985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1105806 - 1105985

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGGCTG

5'SS Class:

major

3'SS Sequence:

TCTGTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

ACGGGCTGAGGT

Flanking Amino Acid:

PDGFVFTHTSNRMWRKTRSK

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

55.8

48.4

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

82.4

0.73

0.8

73.4

37.1

Minor 5ss

33.8

-1.8

3.6

47.6

47.9

Minor BPS

36.3

-0.9

2.1

46.37

45.5

Associated Gene:

Gene:

CPA1

Ensembl Gene ID:

ENSAPLG00000030146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022364

1104068 - 1109613

5546