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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1106097_1106235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1106097 - 1106235

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CCACCCGCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTGAT

U12 Branch Point Sequence:

AATCCCCAAACT

Flanking Amino Acid:

QASGVWFAKKIVQDQEKDEG

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

37.4

Major BPS

57.3

0.18

1.3

48.8

46.3

Major PPT

61.1

0.25

0.9

30.6

Minor 5ss

27.1

-2.6

3.7

36.6

47.9

Minor BPS

51.9

0.14

74.38

41.6

Associated Gene:

Gene:

CPA1

Ensembl Gene ID:

ENSAPLG00000030146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022364

1104068 - 1109613

5546