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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1106774_1106858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1106774 - 1106858

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCAGC

5'SS Class:

major

3'SS Sequence:

TGTCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

GAGGTCTCAGCC

Flanking Amino Acid:

PYSIMIEDVQALVDQEQMQM

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

67.1

44.6

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

71.9

0.49

0.8

62.4

34.6

Minor 5ss

35.1

-1.7

2.8

43.4

Minor BPS

43.9

-0.4

1.8

48.15

41.5

Associated Gene:

Gene:

CPA1

Ensembl Gene ID:

ENSAPLG00000030146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022364

1104068 - 1109613

5546