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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110894302_110895198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110894302 - 110895198

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTCATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTGGTTAAAA

Flanking Amino Acid:

YDKNIMTKVHACYQLLKL*

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.5

38.5

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

75.1

0.56

0.9

74.2

34.9

Minor 5ss

39.1

-1.2

3.4

53.8

44.4

Minor BPS

0.09

2.5

76.43

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020807

110894276 - 111004123

109848