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Intron Name: Anas_platyrhynchos_platyrhynchos_1_110907557_110909616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110907557 - 110909616

Intron Length:

2060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

TCTTTCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

GAATCTTTAGGT

Flanking Amino Acid:

SPRLMHARNTGGATFIFPNT

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

66.2

44.9

Major BPS

58.9

0.22

49.8

35.1

Major PPT

86.2

0.81

0.6

85.4

21.9

Minor 5ss

34.4

-1.8

3.4

47.3

48.1

Minor BPS

50.6

0.1

1.9

66.84

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032971

110894906 - 110960162

65257

ENSAPLT00000015948

110894906 - 111004172

109267