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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1109827_1110202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1109827 - 1110202

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCCCA

5'SS Class:

major

3'SS Sequence:

CTTCCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCCCAA

U12 Branch Point Sequence:

GGGTCCCAAGGC

Flanking Amino Acid:

QATGVWTANKLAEEYGRDPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

62.5

43.9

Major BPS

48.1

-0.1

1.4

58.4

40.3

Major PPT

83.1

0.74

0.7

76.9

Minor 5ss

43.7

-0.7

2.9

57.8

46.4

Minor BPS

37.6

-0.9

2.2

44.47

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006791

1108457 - 1111162

2706