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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111122494_111125444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111122494 - 111125444

Intron Length:

2951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTAACATTAAGG

Flanking Amino Acid:

VSTMYRGMLKRQPAFDTFDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.8

1.03

0.7

89.6

22.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.3

0.75

0.9

77.1

37.1

Minor 5ss

32.9

-1.9

2.7

43.2

43.8

Minor BPS

47.9

-0.3

54.23

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032850

111122422 - 111164271

41850

ENSAPLT00000020915

111120619 - 111132458

11840