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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111125566_111127361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111125566 - 111127361

Intron Length:

1796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

CTCCTCCCACTT

Flanking Amino Acid:

VPTGFDSTSYESNNCELPLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

85.9

0.81

0.6

22.5

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

39.6

-0.7

1.9

53.34

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032850

111122422 - 111164271

41850

ENSAPLT00000020915

111120619 - 111132458

11840