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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111127482_111127906_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111127482 - 111127906

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

AGTTCTCTAAAT

Flanking Amino Acid:

KEQCRLGIPNNPWLWTEQQV

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

0.9

80.7

31.6

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

85.7

0.8

79.8

32.3

Minor 5ss

40.5

-1.1

3.4

59.8

Minor BPS

59.3

0.37

1.8

77.56

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032850

111122422 - 111164271

41850

ENSAPLT00000020915

111120619 - 111132458

11840