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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111130061_111130193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111130061 - 111130193

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATGA

Flanking Amino Acid:

SNLNLLIDNSGKLREHESSD

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.1

0.61

79.9

31.4

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

63.9

0.43

1.9

78.51

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032850

111122422 - 111164271

41850

ENSAPLT00000020915

111120619 - 111132458

11840