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Intron Name: Anas_platyrhynchos_platyrhynchos_1_111259951_111260952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111259951 - 111260952

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAATGCTGATCA

Flanking Amino Acid:

SSETLKNLVKDVSESTKSLK

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

81.9

0.72

0.7

76.3

32.2

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

47.7

-0.1

2.1

62.64

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019547

111259753 - 111266469

6717

ENSAPLT00000015587

111259753 - 111266525

6773